PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla013555
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bHLH
Protein Properties Length: 154aa    MW: 17907.4 Da    PI: 8.7581
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla013555genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.9e-10147855
               HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
               +E++RR++++s +++L +llP+     +   l+ +    +A++YIksL+
  Cla013555  1 MEKNRRNKMKSLYSKLNSLLPThH--SNELPLTVSNQIDEATKYIKSLE 47
               6*********************66..46667****************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF000109.5E-7147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.865146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-9169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.7E-8164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.39E-5151No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MEKNRRNKMK SLYSKLNSLL PTHHSNELPL TVSNQIDEAT KYIKSLEIKL KNDEEKKERF  60
LRRSKMSSLS LSSSLSYSTP SMSQNRNAPK LKIKDLGSTV EVVLTTGLDD RSIFYEIIDI  120
FHEERAEIIN ISYSTLENTV IYSLHTEVYI REDF
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-25bHLH family protein